Basic Information
Locus ID:
pistato.v30196800
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 918205 | 921359 | + | pistato.v30196800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.57 | 55,648.86 Da | 38.92 | 94.47 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 31 | 350 | 3.3E-74 | IPR000490 |
| Pfam | PF07983 | X8 domain | 368 | 439 | 6.0E-21 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 31 | 350 | 4.57E-81 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 361 | 476 | 3.5E-12 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 30 | 355 | 7.4E-108 | - |
| SMART | SM00768 | X8_cls | 367 | 452 | 7.9E-51 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 265 | 278 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11820.2 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_031284159.1 | glucan endo-1,3-beta-glucosidase 1 isoform X1 [Pistacia vera] | 0 |
| O65399 | Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3 | 0 | |
| TrEMBL | A0A067GS81 | glucan endo-1,3-beta-D-glucosidase OS=Citrus sinensis OX=2711 GN=CISIN_1g010394mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology