Basic Information
Locus ID:
pistato.v30195570
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 30621888 | 30630469 | - | pistato.v30195570 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.99 | 218,168.52 Da | 40.80 | 102.86 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00267 | ABC_ATPase | 176 | 311 | 0.00103974 | - |
| Pfam | PF00931 | NB-ARC domain | 169 | 410 | 9.3E-42 | IPR002182 |
| SUPERFAMILY | SSF52058 | L domain-like | 484 | 881 | 2.95E-25 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1660 | 1882 | 1.96E-7 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 927 | 1236 | 8.63E-10 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1456 | 1704 | 2.51E-15 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 144 | 424 | 1.59E-48 | IPR027417 |
| SUPERFAMILY | SSF52047 | RNI-like | 1163 | 1448 | 1.8E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1109 | 1279 | 2.8E-6 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1287 | 1525 | 7.3E-9 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 324 | 412 | 3.7E-16 | IPR042197 |
| Gene3D | G3DSA:3.40.50.300 | - | 151 | 322 | 9.8E-30 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 896 | 1066 | 5.2E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1733 | 1891 | 8.7E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1583 | 1728 | 1.7E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 514 | 891 | 5.1E-35 | IPR032675 |
| SMART | SM00382 | AAA_5 | 180 | 324 | 6.9E-7 | IPR003593 |
| PRINTS | PR00364 | Disease resistance protein signature | 630 | 646 | 1.0E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 357 | 371 | 1.0E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 183 | 198 | 1.0E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 256 | 270 | 1.0E-20 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031270765.1 | uncharacterized protein LOC116129150 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7IYE2 | AAA domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_002483 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology