Basic Information
Locus ID:
pistato.v30193740
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Domain of unknown function (DUF3598)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 28499605 | 28503853 | + | pistato.v30193740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.28 | 56,481.28 Da | 59.01 | 62.75 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 231 | 287 | 1.3E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 400 | 458 | 1.7E-22 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 228 | 289 | 7.59E-26 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 391 | 460 | 1.31E-26 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 383 | 461 | 1.3E-33 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 219 | 290 | 9.2E-28 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 399 | 459 | 3.6E-36 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 230 | 288 | 2.9E-37 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 394 | 460 | 35.806107 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 225 | 289 | 23.926996 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 300 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 481 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 338 | 374 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 188 | 220 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 348 | 369 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 281 | 300 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 188 | 229 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 460 | 481 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_044480134.1 | probable WRKY transcription factor 3 [Mangifera indica] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A067FZC2 | WRKY transcription factor 3 OS=Citrus sinensis OX=2711 GN=CISIN_1g010802mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology