Basic Information
Locus ID:
pistato.v30193600
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 28323485 | 28326229 | - | pistato.v30193600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.29 | 86,819.36 Da | 45.54 | 78.00 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12819 | Malectin-like domain | 49 | 429 | 1.1E-42 | IPR024788 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 550 | 647 | 6.9E-16 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 522 | 647 | 7.16E-29 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 507 | 620 | 1.5E-33 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 45 | 209 | 7.1E-20 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 241 | 430 | 4.3E-29 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 544 | 779 | 11.849253 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 550 | 573 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 748 | 766 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 748 | 779 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_031249108.1 | LOW QUALITY PROTEIN: receptor-like protein kinase FERONIA [Pistacia vera] | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | A0A061EN54 | Malectin/receptor-like protein kinase family protein, putative OS=Theobroma cacao OX=3641 GN=TCM_018874 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 5 | pistato.v30192840, pistato.v30192850, pistato.v30193010 ... |