Basic Information
Locus ID:
pistato.v30193170
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 27305440 | 27308904 | + | pistato.v30193170 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 114,777.82 Da | 35.86 | 98.85 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 266 | 288 | 0.015 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 413 | 435 | 1.8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 869 | 956 | 9.2E-8 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 655 | 714 | 1.2E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 172 | 230 | 8.3E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 41 | 81 | 9.0E-12 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 134 | 277 | 1.93E-25 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 242 | 746 | 1.45E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 848 | 1057 | 9.2E-27 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 352 | 495 | 1.7E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 241 | 351 | 1.4E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 530 | 761 | 1.0E-51 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 40 | 240 | 3.8E-42 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 829 | 952 | 1.6E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 953 | 1062 | 9.6E-9 | - |
| SMART | SM00369 | LRR_typ_2 | 701 | 724 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 170 | 193 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 264 | 288 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 312 | 336 | 23.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 218 | 242 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 194 | 217 | 88.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 677 | 700 | 16.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 866 | 1063 | 12.315675 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 872 | 894 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 438 | 451 | 4.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 677 | 690 | 4.7E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.1 | receptor-like protein kinase 2. | 0 |
| RefSeq | XP_031268556.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Pistacia vera] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2H5PKD5 | Protein kinase domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_144960 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology