Basic Information
Locus ID:
pistato.v30192840
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 26688265 | 26692177 | - | pistato.v30192840 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 88,330.24 Da | 49.13 | 86.19 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12819 | Malectin-like domain | 200 | 575 | 7.8E-35 | IPR024788 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 688 | 780 | 3.8E-16 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 657 | 782 | 1.02E-27 | IPR011009 |
| Gene3D | G3DSA:2.60.120.430 | - | 24 | 169 | 4.0E-12 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 196 | 363 | 1.1E-15 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 650 | 759 | 9.9E-31 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 390 | 577 | 2.8E-24 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 682 | 783 | 13.502931 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 688 | 712 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_031251789.1 | LOW QUALITY PROTEIN: receptor-like protein kinase FERONIA, partial [Pistacia vera] | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | V4T2J5 | Protein kinase domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10011088mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 5 | pistato.v30192840, pistato.v30192850, pistato.v30193010 ... |