Basic Information
Locus ID:
pistato.v30192240
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Short Name:
NIK1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 25781977 | 25785454 | + | pistato.v30192240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.87 | 43,026.92 Da | 41.90 | 92.44 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 20 | 59 | 1.2E-14 | IPR013210 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 86 | 126 | 7.4E-7 | IPR025875 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 295 | 382 | 1.6E-13 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 267 | 383 | 1.83E-26 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 21 | 184 | 6.8E-39 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 19 | 201 | 5.7E-56 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 261 | 368 | 4.7E-39 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 292 | 389 | 13.488796 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 298 | 320 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G16000.1 | NSP-interacting kinase 1. NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP). | 0 |
| RefSeq | XP_031279292.1 | protein NSP-INTERACTING KINASE 1-like isoform X1 [Pistacia vera] | 0 |
| Q9LFS4 | Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana OX=3702 GN=NIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067EYD3 | Protein kinase domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g036225mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology