Basic Information
Locus ID:
pistato.v30189500
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 20753392 | 20759833 | - | pistato.v30189500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.08 | 79,115.75 Da | 39.95 | 87.19 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 401 | 657 | 6.24262E-94 | - |
| Pfam | PF00069 | Protein kinase domain | 396 | 657 | 1.2E-49 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 194 | 289 | 5.9E-13 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 70 | 135 | 7.3E-9 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 375 | 660 | 6.61E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 472 | 672 | 1.9E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 370 | 471 | 1.4E-32 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 60 | 153 | 1.4E-12 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 189 | 292 | 3.9E-19 | IPR038408 |
| SMART | SM00220 | serkin_6 | 395 | 660 | 9.8E-34 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 60 | 167 | 10.921809 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 395 | 672 | 39.749767 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 187 | 292 | 16.588423 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 401 | 424 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 512 | 524 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 682 | 709 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 684 | 709 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70520.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 2. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_031275886.1 | cold-responsive protein kinase 1-like isoform X1 [Pistacia vera] | 0 |
| Q9CAL3 | Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2H5MZI1 | Cysteine-rich receptor-like protein kinase 2 OS=Citrus unshiu OX=55188 GN=CUMW_006980 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg19989, jg31015, jg31016 |
| Anacardiaceae | Pistacia vera | 4 | pistato.v30189500, pistato.v30211710, pistato.v30211720 ... |
| Apiaceae | Apium graveolens | 10 | Ag1G00564, Ag1G00565, Ag1G00566, Ag1G00568, Ag1G00570 ... |
| Arecaceae | Cocos nucifera | 2 | scaffold008549G000040, scaffold011035G000010 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103696787, gene-LOC103723943 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.488.V1.1 |
| Asteraceae | Flaveria trinervia | 18 | Ftri11G14745, Ftri12G25564, Ftri13G11556, Ftri17G00417 ... |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq08G0814, Ceq08G0815 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl08G0823, Cgl08G0825 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g00940 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00021177, Pov_00021179 |
| Poaceae | Echinochloa crus-galli | 2 | CH01.2086, Contig328.93 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0128400, gene-QOZ80_2BG0183800 |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.1HG0044490.1, HORVU.MOREX.r3.3HG0221160.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_011667 |
| Poaceae | Oryza coarctata | 2 | Oco19G006360, Oco20G006340 |
| Poaceae | Oryza sativa | 2 | LOC_Os10g34220.1, LOC_Os11g28104.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G199800 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0502615 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr09G011520 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G291700 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC1AG024250, gene_TRIDC1BG029490 ... |
| Poaceae | Triticum aestivum | 8 | TraesCS1A02G159500.2, TraesCS1B02G175900.3 ... |
| Poaceae | Zea mays | 1 | Zm00001eb221490_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-19164 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g16223 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc06g14200, gene.Posoc06g14220 |
| Rhizophoraceae | Bruguiera sexangula | 6 | evm.TU.44380.1, evm.TU.53452.1, evm.TU.53454.1 ... |
| Rhizophoraceae | Carallia pectinifolia | 5 | nbisL1-mrna-16342, nbisL1-mrna-29524, nbisL1-mrna-29526 ... |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-12477, nbisL1-mrna-8445 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-1184 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000011l.879 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00007051, Maker00008351 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-13423, nbisL1-mrna-13424 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-3890, nbisL1-mrna-3891 |
| Salicaceae | Populus euphratica | 3 | populus_peu01772, populus_peu24740, populus_peu24741 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132615264, gene-LOC132616170 |
| Solanaceae | Solanum chilense | 1 | SOLCI006755500 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107003255 |