Basic Information
Locus ID:
pistato.v30185320
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 9232753 | 9236616 | - | pistato.v30185320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.11 | 121,001.84 Da | 27.83 | 112.16 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 135 | 194 | 2.9E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1015 | 1088 | 7.0E-13 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 281 | 302 | 1.2 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 821 | 880 | 1.3E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 377 | 434 | 1.4E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 673 | 733 | 4.3E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 208 | 230 | 0.88 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 59 | 9.0E-10 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 984 | 1087 | 2.95E-22 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 623 | 906 | 4.08E-63 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 42 | 354 | 2.24E-56 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 390 | 608 | 3.06E-45 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 205 | 352 | 4.6E-43 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 133 | 204 | 9.5E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 353 | 625 | 9.0E-74 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 132 | 2.5E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 626 | 695 | 4.1E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 790 | 914 | 3.8E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 696 | 789 | 5.9E-25 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 974 | 1086 | 1.1E-38 | - |
| SMART | SM00365 | LRR_sd22_2 | 278 | 304 | 320.0 | - |
| SMART | SM00369 | LRR_typ_2 | 278 | 302 | 57.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 744 | 767 | 420.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 867 | 895 | 440.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 206 | 232 | 130.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 326 | 349 | 350.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 445 | 468 | 270.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 109 | 141 | 390.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 672 | 693 | 2.6 | - |
| SMART | SM00365 | LRR_sd22_2 | 157 | 183 | 86.0 | - |
| SMART | SM00369 | LRR_typ_2 | 397 | 421 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 230 | 254 | 52.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 109 | 133 | 34.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 867 | 890 | 10.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 540 | 564 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 819 | 843 | 400.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 157 | 179 | 55.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 466 | 491 | 260.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 588 | 612 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 326 | 350 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 206 | 229 | 44.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 720 | 743 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 181 | 205 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 672 | 696 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 85 | 108 | 36.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 744 | 768 | 26.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1011 | 1114 | 12.386344 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 674 | 695 | 7.026593 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1017 | 1040 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 209 | 222 | 2.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 672 | 685 | 2.9E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G07280.1 | Leucine-rich repeat transmembrane protein kinase. Encodes EMS1 (EXCESS MICROSPOROCYTES1), a putative leucine-rich repeat receptor protein kinase that controls somatic and reproductive cell fates in Arabidopsis anther. | 0 |
| RefSeq | XP_031261001.1 | leucine-rich repeat receptor protein kinase EMS1-like [Pistacia vera] | 0 |
| Q9LYN8 | Leucine-rich repeat receptor protein kinase EMS1 OS=Arabidopsis thaliana OX=3702 GN=EMS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7IP74 | Protein kinase domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_005804 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 4 | jg12909, jg14016, jg2319, jg889 |
| Anacardiaceae | Pistacia vera | 8 | pistato.v30034580, pistato.v30167950, pistato.v30168050 ... |
| Apiaceae | Apium graveolens | 1 | Ag2G01986 |
| Asteraceae | Flaveria trinervia | 1 | Ftri17G03190 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G07280.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10012465m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g35610.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB02g053610.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G2102 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G2175 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.2700 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00010232 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC1BG058770 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-12656, nbisL1-mrna-29200 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-10442, nbisL1-mrna-7229 |
| Rhizophoraceae | Ceriops zippeliana | 3 | nbisL1-mrna-12927, nbisL1-mrna-12928, nbisL1-mrna-2139 |
| Rhizophoraceae | Kandelia candel | 2 | add.evm.TU.utg000008l.31, add.evm.TU.utg000010l.151 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-17149, nbisL1-mrna-17646 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-20612, nbisL1-mrna-6260 |
| Salicaceae | Populus euphratica | 2 | populus_peu29255, populus_peu30617 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132631870 |
| Solanaceae | Solanum chilense | 1 | SOLCI001805500 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107014643 |