Basic Information
Locus ID:
pistato.v30183570
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 6597229 | 6600034 | + | pistato.v30183570 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.87 | 69,223.92 Da | 39.73 | 87.83 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 5 | 178 | 1.25936E-77 | - |
| Pfam | PF00183 | Hsp90 protein | 211 | 601 | 5.2E-169 | IPR001404 |
| Pfam | PF13589 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 16 | 130 | 1.9E-9 | - |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 4 | 178 | 1.44E-48 | IPR036890 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 463 | 572 | 5.62E-31 | IPR037196 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 210 | 443 | 6.45E-95 | IPR020568 |
| Gene3D | G3DSA:1.20.120.790 | - | 443 | 576 | 8.0E-43 | IPR037196 |
| Gene3D | G3DSA:3.30.565.10 | - | 3 | 182 | 8.7E-59 | IPR036890 |
| Gene3D | G3DSA:3.30.230.80 | - | 183 | 355 | 2.0E-69 | - |
| Gene3D | G3DSA:3.40.50.11260 | - | 356 | 442 | 1.8E-41 | - |
| PIRSF | PIRSF002583 | HSP90_HTPG | 4 | 607 | 4.2E-189 | IPR001404 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 13 | 35 | 2.1E-49 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 77 | 94 | 2.1E-49 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 151 | 168 | 2.1E-49 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 102 | 124 | 2.1E-49 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 59 | 76 | 2.1E-49 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 1 | 573 | 21.410294 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 581 | 607 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 203 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 579 | 607 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 208 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52640.1 | heat shock protein 90.1. Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. | 0 |
| RefSeq | XP_044505063.1 | heat shock protein 83 [Mangifera indica] | 0 |
| P51819 | Heat shock protein 83 OS=Ipomoea nil OX=35883 GN=HSP83A PE=2 SV=1 | 0 | |
| TrEMBL | A0A498KLI6 | HATPase_c domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_022501 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology