Basic Information
Locus ID:
pistato.v30180680
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 3131177 | 3135790 | - | pistato.v30180680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 112,380.54 Da | 32.23 | 102.44 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 72 | 9.9E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 510 | 568 | 2.5E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 714 | 983 | 1.2E-47 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 246 | 268 | 0.15 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 295 | 316 | 0.49 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 370 | 619 | 1.7E-49 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 52 | 402 | 1.9E-62 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 714 | 986 | 1.48E-72 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 790 | 998 | 6.8E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 187 | 286 | 2.6E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 507 | 627 | 3.6E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 456 | 506 | 9.5E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 388 | 455 | 1.6E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 186 | 1.5E-41 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 287 | 387 | 5.2E-27 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 690 | 789 | 1.1E-19 | - |
| SMART | SM00369 | LRR_typ_2 | 340 | 363 | 48.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 195 | 219 | 210.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 711 | 990 | 3.8E-34 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 436 | 460 | 42.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 555 | 578 | 98.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 244 | 268 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 292 | 316 | 3.9 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 123 | 147 | 54.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 461 | 484 | 190.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 711 | 996 | 38.760387 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 294 | 317 | 7.00349 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 837 | 849 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 717 | 740 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_031265586.1 | LOW QUALITY PROTEIN: leucine-rich repeat receptor-like protein kinase TDR [Pistacia vera] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | V4S7R3 | Protein kinase domain-containing protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10004254mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology