Basic Information
Locus ID:
pistato.v30179340
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the glycosyl hydrolase 18 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 1293019 | 1294239 | - | pistato.v30179340 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.00 | 45,142.75 Da | 49.54 | 68.47 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02879 | GH18_plant_chitinase_class_V | 57 | 396 | 6.69461E-138 | - |
| Pfam | PF00704 | Glycosyl hydrolases family 18 | 62 | 390 | 5.0E-71 | IPR001223 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 63 | 393 | 1.89E-62 | IPR017853 |
| SUPERFAMILY | SSF54556 | Chitinase insertion domain | 296 | 361 | 1.27E-15 | IPR029070 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 78 | 389 | 2.8E-99 | - |
| Gene3D | G3DSA:3.10.50.10 | - | 295 | 361 | 2.8E-99 | IPR029070 |
| SMART | SM00636 | 2g34 | 59 | 390 | 3.4E-88 | IPR011583 |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. | 59 | 406 | 60.2285 | IPR001223 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 48 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19800.1 | Glycosyl hydrolase family protein with chitinase insertion domain. | 0 |
| RefSeq | XP_031280329.1 | class V chitinase CHIT5a-like [Pistacia vera] | 0 |
| A0A072VEP0 | Class V chitinase CHIT5a OS=Medicago truncatula OX=3880 GN=CHIT5A PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0ZRU9 | acidic mammalian chitinase-like OS=Herrania umbratica OX=108875 GN=LOC110411551 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology