Basic Information
Locus ID:
pistato.v30174610
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 45821901 | 45825133 | - | pistato.v30174610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.55 | 60,996.06 Da | 42.38 | 84.97 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 36 | 134 | 3.3E-15 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 282 | 390 | 2.7E-28 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 156 | 221 | 5.0E-12 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 281 | 458 | 4.99E-49 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 267 | 465 | 2.5E-58 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 140 | 224 | 6.9E-20 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 26 | 136 | 4.0E-18 | IPR038408 |
| SMART | SM00220 | serkin_6 | 243 | 434 | 1.3E-7 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 159 | 463 | 24.428511 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 28 | 136 | 16.289705 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 308 | 320 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23280.3 | - | 0 |
| RefSeq | XP_031254255.1 | putative receptor-like protein kinase At4g00960 [Pistacia vera] | 0 |
| Q8S9L6 | Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana OX=3702 GN=CRK29 PE=2 SV=1 | 0 | |
| TrEMBL | V4UJ78 | Receptor-like protein kinase At4g00960 OS=Citrus clementina OX=85681 GN=CICLE_v10014521mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 2 | pistato.v30172040, pistato.v30174610 |