Basic Information
Locus ID:
pistato.v30173660
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 43210739 | 43214872 | + | pistato.v30173660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.41 | 143,006.69 Da | 33.58 | 104.85 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 306 | 423 | 9.0E-16 | IPR002182 |
| Pfam | PF00931 | NB-ARC domain | 165 | 286 | 8.2E-22 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 158 | 438 | 1.14E-43 | IPR027417 |
| SUPERFAMILY | SSF52047 | RNI-like | 911 | 1199 | 1.88E-13 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 497 | 957 | 4.93E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 908 | 1029 | 8.8E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1126 | 1240 | 1.3E-5 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 540 | 907 | 2.3E-33 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 338 | 420 | 5.2E-16 | IPR042197 |
| Gene3D | G3DSA:3.40.50.300 | - | 148 | 336 | 2.3E-27 | IPR027417 |
| SMART | SM00382 | AAA_5 | 179 | 342 | 4.0E-4 | IPR003593 |
| PRINTS | PR00364 | Disease resistance protein signature | 182 | 197 | 3.9E-23 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 371 | 385 | 3.9E-23 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 646 | 662 | 3.9E-23 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 254 | 268 | 3.9E-23 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031280181.1 | probable disease resistance protein At4g27220 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7IXE9 | AAA domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_002494 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology