Basic Information
Locus ID:
pistato.v30173590
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 43110385 | 43112506 | - | pistato.v30173590 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.21 | 40,829.49 Da | 46.19 | 80.89 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 26 | 123 | 1.5E-19 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 139 | 217 | 4.1E-10 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 323 | 357 | 1.07E-5 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 135 | 243 | 6.2E-19 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 20 | 125 | 3.7E-24 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 317 | 367 | 7.2E-7 | - |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 134 | 243 | 15.683213 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 20 | 126 | 18.842398 | IPR002902 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23190.2 | - | 0 |
| RefSeq | XP_031284373.1 | putative receptor-like protein kinase At4g00960 [Pistacia vera] | 0 |
| Q9ZP16 | Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana OX=3702 GN=CRK11 PE=2 SV=2 | 0 | |
| TrEMBL | A0A067GAD9 | Cysteine-rich receptor-like protein kinase 25 (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g044262mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 21 | pistato.v30128710, pistato.v30173520, pistato.v30173530 ... |
| Brassicaceae | Brassica nigra | 1 | BniB07g024080.2N |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG12.589, evm.TU.LG12.599 |