Basic Information
Locus ID:
pistato.v30173540
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 43050599 | 43052069 | - | pistato.v30173540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.22 | 27,241.65 Da | 52.04 | 77.72 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 27 | 114 | 3.6E-14 | IPR002902 |
| Gene3D | G3DSA:3.30.430.20 | - | 22 | 117 | 1.2E-15 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 123 | 215 | 1.1E-10 | IPR038408 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 118 | 215 | 8.68594 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 9 | 117 | 12.858958 | IPR002902 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11480.2 | - | 0 |
| RefSeq | XP_031251360.1 | LOW QUALITY PROTEIN: putative receptor-like protein kinase At4g00960 [Pistacia vera] | 0 |
| Q9LDS6 | Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana OX=3702 GN=CRK32 PE=3 SV=1 | 0 | |
| TrEMBL | V4USX9 | Protein kinase domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10011354mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 21 | pistato.v30128710, pistato.v30173520, pistato.v30173530 ... |
| Brassicaceae | Brassica nigra | 1 | BniB07g024080.2N |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG12.589, evm.TU.LG12.599 |