Basic Information
Locus ID:
pistato.v30173520
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 43022892 | 43040549 | - | pistato.v30173520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.71 | 135,165.34 Da | 50.00 | 79.57 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 505 | 598 | 1.2E-10 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 389 | 486 | 5.2E-19 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 806 | 903 | 8.2E-19 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 149 | 229 | 3.0E-12 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 35 | 131 | 3.1E-21 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 229 | 325 | 1.3E-6 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1136 | 1201 | 2.3E-8 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 1040 | 1115 | 1.1E-10 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 923 | 996 | 2.1E-10 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 229 | 356 | 1.19E-13 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1153 | 1189 | 3.56E-9 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 653 | 737 | 1.3E-5 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 143 | 238 | 1.9E-21 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 1030 | 1119 | 6.0E-21 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 383 | 489 | 8.8E-26 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 27 | 133 | 1.2E-29 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1120 | 1217 | 1.2E-10 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 800 | 906 | 3.8E-24 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 498 | 605 | 6.1E-20 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 915 | 1016 | 3.1E-18 | IPR038408 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 29 | 134 | 21.874851 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 1027 | 1132 | 16.452642 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 912 | 1022 | 14.587909 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 383 | 489 | 19.792868 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 800 | 906 | 19.54846 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 140 | 245 | 18.244959 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 495 | 605 | 16.371174 | IPR002902 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23250.2 | - | 0 |
| RefSeq | XP_031251360.1 | LOW QUALITY PROTEIN: putative receptor-like protein kinase At4g00960 [Pistacia vera] | 0 |
| Q8H199 | Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana OX=3702 GN=CRK14 PE=2 SV=2 | 0 | |
| TrEMBL | A0A7J6HTQ9 | Cysteine-rich receptor-like protein kinase 10 OS=Cannabis sativa OX=3483 GN=G4B88_019769 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 21 | pistato.v30128710, pistato.v30173520, pistato.v30173530 ... |
| Brassicaceae | Brassica nigra | 1 | BniB07g024080.2N |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG12.589, evm.TU.LG12.599 |