Basic Information
Locus ID:
pistato.v30172040
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 40856482 | 40859230 | + | pistato.v30172040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.47 | 59,940.86 Da | 41.31 | 84.01 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 159 | 246 | 2.6E-14 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 36 | 134 | 3.7E-15 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 309 | 412 | 2.9E-25 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 306 | 496 | 1.35E-41 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 26 | 135 | 1.5E-18 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 292 | 483 | 2.0E-49 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 145 | 249 | 3.1E-23 | IPR038408 |
| SMART | SM00220 | serkin_6 | 224 | 452 | 1.2E-6 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 28 | 136 | 16.425486 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 184 | 481 | 20.598198 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 142 | 250 | 18.072969 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 326 | 338 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23280.3 | - | 0 |
| RefSeq | XP_031254255.1 | putative receptor-like protein kinase At4g00960 [Pistacia vera] | 0 |
| Q8S9L6 | Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana OX=3702 GN=CRK29 PE=2 SV=1 | 0 | |
| TrEMBL | V4UJ78 | Receptor-like protein kinase At4g00960 OS=Citrus clementina OX=85681 GN=CICLE_v10014521mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 2 | pistato.v30172040, pistato.v30174610 |