Basic Information
Locus ID:
pistato.v30171590
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 40268916 | 40273100 | - | pistato.v30171590 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.49 | 150,947.91 Da | 45.67 | 69.39 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 790 | 872 | 3.54996E-29 | - |
| Pfam | PF00855 | PWWP domain | 786 | 870 | 4.3E-17 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 781 | 890 | 6.02E-27 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 774 | 881 | 1.9E-25 | - |
| SMART | SM00293 | PWWP_4 | 786 | 847 | 2.2E-9 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 788 | 849 | 15.023396 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 141 | 171 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 316 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 355 | 379 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 75 | 171 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 354 | 391 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 995 | 1023 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 306 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1239 | 1288 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 86 | 100 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1054 | 1073 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02950.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_031282967.1 | uncharacterized protein LOC116141627 isoform X1 [Pistacia vera] | 0 |
| Q9LYZ0 | PWWP domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=PDP5 PE=2 SV=1 | 0 | |
| TrEMBL | V4VB00 | PWWP domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10030525mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology