Basic Information
Locus ID:
pistato.v30170970
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 39599728 | 39603764 | - | pistato.v30170970 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.52 | 70,472.88 Da | 40.81 | 92.12 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 25 | 114 | 5.7E-6 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 212 | 476 | 3.2E-93 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 15 | 130 | 1.1E-16 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 18 | 136 | 2.2E-11 | IPR011333 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 212 | 500 | 92.659172 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 28 | 98 | 9.620175 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 590 | 631 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 601 | 617 | - | - |
| Coils | Coil | Coil | 546 | 573 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03250.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_031257458.1 | BTB/POZ domain-containing protein At5g03250-like [Pistacia vera] | 0 |
| Q9LYW0 | BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=At5g03250 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2H5PYG4 | NPH3 domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_178960 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology