Basic Information
Locus ID:
pistato.v30169720
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Hippocampus abundant transcript-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 37916999 | 37923832 | + | pistato.v30169720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 47,128.02 Da | 37.09 | 117.52 | 0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 17 | 406 | 4.32084E-47 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 57 | 375 | 4.2E-23 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 57 | 412 | 8.63E-35 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 23 | 412 | 4.2E-33 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 1 | 413 | 9.229412 | IPR020846 |
| ProSitePatterns | PS00216 | Sugar transport proteins signature 1. | 75 | 91 | - | IPR005829 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_031268714.1 | hippocampus abundant transcript-like protein 1 isoform X1 [Pistacia vera] | 0 |
| TrEMBL | A0A5C7GX71 | MFS domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_025213 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology