Basic Information
Locus ID:
pistato.v30169130
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 37047724 | 37064768 | - | pistato.v30169130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 135,278.16 Da | 40.52 | 79.33 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02659 | peptidase_C19C | 194 | 522 | 6.5283E-170 | - |
| CDD | cd00121 | MATH | 53 | 176 | 5.4056E-41 | IPR002083 |
| Pfam | PF12436 | ICP0-binding domain of Ubiquitin-specific protease 7 | 621 | 873 | 8.4E-77 | IPR024729 |
| Pfam | PF14533 | Ubiquitin-specific protease C-terminal | 883 | 1135 | 7.4E-47 | IPR029346 |
| Pfam | PF00917 | MATH domain | 58 | 177 | 7.7E-20 | IPR002083 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 196 | 517 | 6.8E-46 | IPR001394 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 49 | 184 | 4.91E-43 | - |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 191 | 549 | 7.85E-98 | IPR038765 |
| Gene3D | G3DSA:3.10.20.90 | - | 682 | 798 | 4.3E-45 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 799 | 896 | 1.8E-27 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 50 | 191 | 2.0E-54 | IPR008974 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 192 | 521 | 4.6E-90 | - |
| SMART | SM00061 | math_3 | 53 | 157 | 8.7E-22 | IPR002083 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 196 | 520 | 40.417988 | IPR028889 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 51 | 176 | 39.082245 | IPR002083 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 197 | 212 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 436 | 453 | - | IPR018200 |
| Coils | Coil | Coil | 533 | 561 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06600.1 | ubiquitin-specific protease 12. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_031270955.1 | ubiquitin carboxyl-terminal hydrolase 12-like [Pistacia vera] | 0 |
| Q9FPT1 | Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A4U5MCJ8 | ubiquitinyl hydrolase 1 OS=Populus alba OX=43335 GN=D5086_0000311330 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology