Basic Information
Locus ID:
pistato.v30168840
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Calcium and calcium calmodulin-dependent serine threonine-protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 36635345 | 36639047 | + | pistato.v30168840 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.97 | 48,199.29 Da | 51.43 | 91.86 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 347 | 414 | 8.26961E-13 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 11 | 211 | 1.61388E-105 | - |
| Pfam | PF13202 | EF hand | 315 | 330 | 0.032 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 345 | 414 | 9.3E-15 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 3 | 212 | 1.0E-55 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 10 | 220 | 3.1E-66 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 257 | 419 | 1.29E-34 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 40 | 255 | 9.5E-59 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 256 | 424 | 1.7E-37 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 39 | 1.8E-11 | - |
| SMART | SM00220 | serkin_6 | 2 | 212 | 1.7E-53 | IPR000719 |
| SMART | SM00054 | efh_1 | 346 | 374 | 0.0011 | IPR002048 |
| SMART | SM00054 | efh_1 | 310 | 338 | 1.9 | IPR002048 |
| SMART | SM00054 | efh_1 | 388 | 416 | 6.2E-7 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 212 | 40.4706 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 313 | 341 | 8.878534 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 342 | 377 | 12.923368 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 384 | 419 | 14.373928 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 319 | 331 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 73 | 85 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 397 | 409 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 355 | 367 | - | IPR018247 |
| PRINTS | PR00450 | Recoverin family signature | 404 | 424 | 3.9E-10 | - |
| PRINTS | PR00450 | Recoverin family signature | 268 | 287 | 3.9E-10 | - |
| PRINTS | PR00450 | Recoverin family signature | 314 | 335 | 3.9E-10 | - |
| PRINTS | PR00450 | Recoverin family signature | 338 | 357 | 3.9E-10 | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19360.1 | calcium-dependent protein kinase 34. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_031260589.1 | calcium and calcium/calmodulin-dependent serine/threonine-protein kinase-like isoform X1 [Pistacia vera] | 0 |
| A0AAR7 | Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase OS=Lotus japonicus OX=34305 GN=CCAMK PE=1 SV=1 | 0 | |
| TrEMBL | A0A067E5M4 | Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase OS=Citrus sinensis OX=2711 GN=CISIN_1g009980mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30168840 |
| Apiaceae | Apium graveolens | 1 | Ag3G02085 |
| Arecaceae | Cocos nucifera | 2 | COCNU_04G005670, COCNU_04G005700 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103709055 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_02.1301.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G25598 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G1578 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G1608 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG02.1013 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00006959, Pov_00014745 |
| Poaceae | Echinochloa crus-galli | 3 | AH05.1968, BH05.2092, CH05.2164 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5AG0368830, gene-QOZ80_5BG0416380 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0069960.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_013966 |
| Poaceae | Oryza coarctata | 2 | Oco09G012740, Oco10G012820 |
| Poaceae | Oryza sativa | 1 | LOC_Os05g41090.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G240800 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0504440, Pt_Chr0504501 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr18G012590, Chr22G005170 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G495900 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC1AG045650, gene_TRIDC1BG051680 |
| Poaceae | Triticum aestivum | 3 | TraesCS1A02G307200.1, TraesCS1B02G318000.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb200350_P004, Zm00001eb306730_P002 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-25330 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g28476 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g28890 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_1_RagTag.1112 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-6503 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-20877 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-21100 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000016l.840 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00017089 |
| Rhizophoraceae | Rhizophora apiculata | 3 | nbisL1-mrna-11027, nbisL1-mrna-21129, nbisL1-mrna-21130 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-13317 |
| Salicaceae | Populus euphratica | 2 | populus_peu06012, populus_peu19879 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132645338 |
| Solanaceae | Solanum chilense | 1 | SOLCI001256100 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107028598 |