Basic Information
Locus ID:
pistato.v30168210
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 34679161 | 34682298 | - | pistato.v30168210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.63 | 110,513.70 Da | 33.84 | 101.30 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 526 | 584 | 6.2E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 142 | 201 | 2.3E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 72 | 128 | 2.2E-9 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 288 | 310 | 0.051 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 693 | 980 | 5.4E-44 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 67 | 2.6E-5 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 687 | 982 | 1.89E-70 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 44 | 350 | 1.02E-55 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 285 | 592 | 4.16E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 383 | 626 | 5.6E-58 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 771 | 995 | 4.4E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 181 | 285 | 3.9E-25 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 667 | 770 | 6.3E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 286 | 382 | 1.0E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 180 | 1.1E-42 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 141 | 165 | 35.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 500 | 523 | 80.0 | - |
| SMART | SM00369 | LRR_typ_2 | 239 | 263 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 571 | 594 | 48.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 500 | 524 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 93 | 116 | 9.6 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 286 | 315 | 39.0 | - |
| SMART | SM00369 | LRR_typ_2 | 189 | 211 | 320.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 691 | 987 | 6.3E-32 | IPR000719 |
| SMART | SM00365 | LRR_sd22_2 | 93 | 125 | 390.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 165 | 191 | 610.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 239 | 268 | 230.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 691 | 987 | 38.011284 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 697 | 720 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 834 | 846 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_031280996.1 | LOW QUALITY PROTEIN: receptor-like protein kinase 5 [Pistacia vera] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6P4BK70 | receptor-like protein kinase 5 OS=Ziziphus jujuba OX=326968 GN=LOC107432847 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology