Basic Information
Locus ID:
pistato.v30168110
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 34164619 | 34168496 | + | pistato.v30168110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.35 | 134,951.86 Da | 28.09 | 108.80 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 965 | 1231 | 5.8E-45 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 135 | 194 | 2.1E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 369 | 426 | 2.8E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 59 | 3.5E-4 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 200 | 222 | 0.92 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 768 | 827 | 5.5E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 694 | 713 | 1.9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 352 | 555 | 8.33E-41 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 566 | 853 | 2.15E-60 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 942 | 1233 | 2.02E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 40 | 346 | 1.6E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 561 | 862 | 3.0E-84 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 199 | 346 | 6.6E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 347 | 459 | 5.9E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 460 | 560 | 1.1E-20 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1037 | 1237 | 1.4E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 133 | 198 | 1.1E-20 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 924 | 1036 | 1.6E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 132 | 4.2E-27 | IPR032675 |
| SMART | SM00365 | LRR_sd22_2 | 181 | 206 | 75.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 619 | 640 | 140.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 814 | 842 | 490.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 691 | 714 | 130.0 | - |
| SMART | SM00369 | LRR_typ_2 | 814 | 837 | 10.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 222 | 246 | 23.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 437 | 460 | 120.0 | - |
| SMART | SM00369 | LRR_typ_2 | 667 | 690 | 45.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 691 | 715 | 11.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 961 | 1233 | 2.1E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 458 | 483 | 260.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 389 | 413 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 535 | 559 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 85 | 108 | 7.9 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 109 | 133 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 198 | 221 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 157 | 181 | 19.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 318 | 341 | 390.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 109 | 141 | 440.0 | - |
| SMART | SM00369 | LRR_typ_2 | 318 | 342 | 410.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 157 | 180 | 190.0 | - |
| SMART | SM00369 | LRR_typ_2 | 766 | 790 | 150.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 183 | 205 | 7.611846 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 961 | 1239 | 37.940617 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 967 | 990 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1083 | 1095 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 160 | 173 | 5.0E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 198 | 211 | 5.0E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G07280.1 | Leucine-rich repeat transmembrane protein kinase. Encodes EMS1 (EXCESS MICROSPOROCYTES1), a putative leucine-rich repeat receptor protein kinase that controls somatic and reproductive cell fates in Arabidopsis anther. | 0 |
| RefSeq | XP_031266111.1 | LOW QUALITY PROTEIN: leucine-rich repeat receptor protein kinase EMS1 [Pistacia vera] | 0 |
| Q9LYN8 | Leucine-rich repeat receptor protein kinase EMS1 OS=Arabidopsis thaliana OX=3702 GN=EMS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067JEQ6 | Protein kinase domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_26138 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 4 | jg12909, jg14016, jg2319, jg889 |
| Anacardiaceae | Pistacia vera | 8 | pistato.v30034580, pistato.v30167950, pistato.v30168050 ... |
| Apiaceae | Apium graveolens | 1 | Ag2G01986 |
| Asteraceae | Flaveria trinervia | 1 | Ftri17G03190 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G07280.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10012465m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g35610.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB02g053610.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G2102 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G2175 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.2700 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00010232 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC1BG058770 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-12656, nbisL1-mrna-29200 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-10442, nbisL1-mrna-7229 |
| Rhizophoraceae | Ceriops zippeliana | 3 | nbisL1-mrna-12927, nbisL1-mrna-12928, nbisL1-mrna-2139 |
| Rhizophoraceae | Kandelia candel | 2 | add.evm.TU.utg000008l.31, add.evm.TU.utg000010l.151 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-17149, nbisL1-mrna-17646 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-20612, nbisL1-mrna-6260 |
| Salicaceae | Populus euphratica | 2 | populus_peu29255, populus_peu30617 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132631870 |
| Solanaceae | Solanum chilense | 1 | SOLCI001805500 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107014643 |