Basic Information
Locus ID:
pistato.v30168050
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 34018694 | 34026615 | + | pistato.v30168050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 127,723.25 Da | 28.35 | 111.11 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 362 | 384 | 0.94 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 951 | 1010 | 6.8E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 55 | 111 | 6.4E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 242 | 298 | 6.7E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 877 | 896 | 1.6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 531 | 588 | 8.6E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 512 | 763 | 8.33E-42 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1113 | 1164 | 1.28E-8 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 43 | 503 | 5.57E-57 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 783 | 1033 | 4.42E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 288 | 356 | 1.0E-15 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1095 | 1170 | 5.6E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 208 | 287 | 2.5E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 357 | 509 | 2.6E-41 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 770 | 1041 | 6.2E-73 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 711 | 769 | 3.2E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 510 | 710 | 8.6E-49 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 8 | 162 | 2.4E-21 | IPR032675 |
| SMART | SM00365 | LRR_sd22_2 | 599 | 622 | 120.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 874 | 897 | 130.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 78 | 110 | 470.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 997 | 1025 | 650.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 335 | 362 | 66.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 432 | 453 | 200.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 480 | 503 | 390.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 265 | 297 | 470.0 | - |
| SMART | SM00369 | LRR_typ_2 | 384 | 408 | 31.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 742 | 766 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 432 | 456 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 241 | 264 | 9.8 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 265 | 289 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 997 | 1020 | 6.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 551 | 575 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 78 | 102 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 620 | 645 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 874 | 898 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 480 | 504 | 410.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 949 | 973 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 850 | 873 | 45.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 335 | 359 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 54 | 77 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 360 | 383 | 44.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 694 | 718 | 170.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1132 | 1170 | 8.584298 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1138 | 1161 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 363 | 376 | 4.5E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 432 | 445 | 4.5E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G07280.1 | Leucine-rich repeat transmembrane protein kinase. Encodes EMS1 (EXCESS MICROSPOROCYTES1), a putative leucine-rich repeat receptor protein kinase that controls somatic and reproductive cell fates in Arabidopsis anther. | 0 |
| RefSeq | XP_031266111.1 | LOW QUALITY PROTEIN: leucine-rich repeat receptor protein kinase EMS1 [Pistacia vera] | 0 |
| Q9LYN8 | Leucine-rich repeat receptor protein kinase EMS1 OS=Arabidopsis thaliana OX=3702 GN=EMS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067JEQ6 | Protein kinase domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_26138 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 4 | jg12909, jg14016, jg2319, jg889 |
| Anacardiaceae | Pistacia vera | 8 | pistato.v30034580, pistato.v30167950, pistato.v30168050 ... |
| Apiaceae | Apium graveolens | 1 | Ag2G01986 |
| Asteraceae | Flaveria trinervia | 1 | Ftri17G03190 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G07280.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10012465m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g35610.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB02g053610.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G2102 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G2175 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.2700 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00010232 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC1BG058770 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-12656, nbisL1-mrna-29200 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-10442, nbisL1-mrna-7229 |
| Rhizophoraceae | Ceriops zippeliana | 3 | nbisL1-mrna-12927, nbisL1-mrna-12928, nbisL1-mrna-2139 |
| Rhizophoraceae | Kandelia candel | 2 | add.evm.TU.utg000008l.31, add.evm.TU.utg000010l.151 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-17149, nbisL1-mrna-17646 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-20612, nbisL1-mrna-6260 |
| Salicaceae | Populus euphratica | 2 | populus_peu29255, populus_peu30617 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132631870 |
| Solanaceae | Solanum chilense | 1 | SOLCI001805500 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107014643 |