Basic Information
Locus ID:
pistato.v30167920
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Serine threonine-protein kinase-like protein CCR4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 33402313 | 33404331 | + | pistato.v30167920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.44 | 73,787.38 Da | 46.70 | 83.68 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 372 | 652 | 3.21172E-92 | - |
| Pfam | PF00069 | Protein kinase domain | 368 | 648 | 4.6E-46 | IPR000719 |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 123 | 147 | 8.5E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 345 | 650 | 7.55E-76 | IPR011009 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 8 | 186 | 4.45E-20 | IPR009091 |
| Gene3D | G3DSA:2.130.10.30 | - | 5 | 198 | 3.7E-22 | IPR009091 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 453 | 659 | 4.4E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 338 | 452 | 5.6E-32 | - |
| SMART | SM00220 | serkin_6 | 366 | 654 | 6.3E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 366 | 654 | 37.99715 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 498 | 510 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 372 | 394 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 229 | 261 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 229 | 251 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_031249971.1 | serine/threonine-protein kinase-like protein CCR4 isoform X1 [Pistacia vera] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A1UWE4 | Serine/threonine-protein kinase-like protein CCR4 OS=Morella rubra OX=262757 GN=CJ030_MR8G027399 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology