Basic Information
Locus ID:
pistato.v30165530
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 25165223 | 25171191 | - | pistato.v30165530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.47 | 37,191.15 Da | 41.05 | 84.43 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 31 | 134 | 2.1E-23 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 167 | 312 | 1.12E-15 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 28 | 146 | 3.42E-30 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 19 | 144 | 2.1E-33 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 173 | 241 | 1.5E-14 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 151 | 307 | 1.5E-14 | - |
| SMART | SM00220 | serkin_6 | 1 | 134 | 5.3E-6 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 134 | 19.552282 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46700.2 | CDPK-related kinase 3. | 0 |
| RefSeq | XP_031257095.1 | CDPK-related kinase 4-like [Pistacia vera] | 0 |
| Q9FIM9 | CDPK-related kinase 4 OS=Arabidopsis thaliana OX=3702 GN=CRK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067DMQ3 | Protein kinase domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g0080841mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000032068 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30165530 |
| Arecaceae | Cocos nucifera | 4 | COCNU_01G016240, COCNU_10G004470, COCNU_16G000340 ... |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_02.1961.V1.1, AsparagusV1_08.550.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri8G26530 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno15g03480 |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.1HG0084940.1, HORVU.MOREX.r3.3HG0283610.1 |
| Poaceae | Zea mays | 3 | Zm00001eb093950_P001, Zm00001eb145760_P001 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-34372, nbis-gene-45412 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG02.1200 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-799 |
| Zosteraceae | Zostera marina | 2 | Zosma02g23970.v3.1, Zosma05g30300.v3.1 |