Basic Information
Locus ID:
pistato.v30165180
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Proteinaceous RNase P 1, chloroplastic
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 23701307 | 23707843 | - | pistato.v30165180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.34 | 65,810.92 Da | 41.62 | 75.49 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18671 | PIN_PRORP-Zc3h12a-like | 407 | 529 | 3.25804E-61 | - |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 92 | 308 | 7.2E-79 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 349 | 575 | 1.9E-71 | IPR031595 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 100 | 578 | 1.3E-240 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 367 | 541 | 1.3E-240 | - |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 186 | 220 | 8.758137 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 74 | 102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 102 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_031261585.1 | proteinaceous RNase P 1, chloroplastic/mitochondrial [Pistacia vera] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | V4TLQ9 | ribonuclease P OS=Citrus clementina OX=85681 GN=CICLE_v10031025mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology