Basic Information
Locus ID:
pistato.v30163010
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 17450474 | 17471979 | + | pistato.v30163010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.57 | 183,892.95 Da | 33.17 | 95.45 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 1031 | 1088 | 2.6E-6 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 725 | 827 | 3.6E-5 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 643 | 721 | 9.4E-16 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1415 | 1542 | 3.9E-23 | IPR001245 |
| Pfam | PF13516 | Leucine Rich repeat | 298 | 312 | 0.28 | IPR001611 |
| Pfam | PF11721 | Malectin domain | 380 | 562 | 3.7E-44 | IPR021720 |
| Pfam | PF11721 | Malectin domain | 1121 | 1307 | 3.6E-39 | IPR021720 |
| SUPERFAMILY | SSF52058 | L domain-like | 69 | 341 | 7.74E-51 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1377 | 1608 | 2.67E-40 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 913 | 1096 | 6.91E-35 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 623 | 837 | 8.14E-43 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 710 | 834 | 1.6E-13 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 154 | 4.5E-17 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 604 | 709 | 1.2E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 880 | 1026 | 2.2E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 155 | 223 | 4.2E-18 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1367 | 1467 | 5.7E-27 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 376 | 566 | 1.1E-36 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 1118 | 1312 | 1.3E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1027 | 1104 | 4.0E-13 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1551 | 1610 | 1.4E-5 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1469 | 1550 | 1.1E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 224 | 352 | 3.9E-25 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 1051 | 1074 | 1.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 177 | 200 | 84.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 297 | 320 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 932 | 955 | 180.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1390 | 1675 | 15.439288 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 639 | 966 | 10.902274 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1634 | 1660 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14840.2 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_031266038.1 | probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 isoform X3 [Pistacia vera] | 0 |
| C0LGN2 | Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 OS=Arabidopsis thaliana OX=3702 GN=LRR-RLK PE=1 SV=1 | 0 | |
| TrEMBL | A0A200QV80 | Armadillo OS=Macleaya cordata OX=56857 GN=BVC80_8559g1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology