Basic Information
Locus ID:
pistato.v30161140
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
SPA1-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 13388633 | 13396827 | + | pistato.v30161140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 104,555.81 Da | 51.84 | 82.78 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 688 | 725 | 2.4E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 791 | 826 | 0.0031 | IPR001680 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 94 | 371 | 2.33E-19 | IPR011009 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 602 | 929 | 8.03E-50 | IPR036322 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 104 | 374 | 5.6E-25 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 578 | 932 | 7.1E-117 | IPR015943 |
| SMART | SM00320 | WD40_4 | 685 | 725 | 4.4E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 788 | 826 | 1.4E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 885 | 930 | 48.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 643 | 682 | 30.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 835 | 874 | 3.3 | IPR001680 |
| SMART | SM00320 | WD40_4 | 597 | 632 | 0.47 | IPR001680 |
| SMART | SM00220 | serkin_6 | 44 | 363 | 4.7E-4 | IPR000719 |
| SMART | SM00320 | WD40_4 | 745 | 784 | 0.53 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 795 | 829 | 10.811958 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 692 | 727 | 12.647216 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 692 | 727 | 10.521959 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 795 | 829 | 13.014815 | IPR001680 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 363 | 10.53479 | IPR000719 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 813 | 827 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 669 | 683 | 3.5E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 813 | 827 | 3.5E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 712 | 726 | 3.5E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 48 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G15354.3 | - | 0 |
| RefSeq | XP_031249756.1 | protein SPA1-RELATED 3-like isoform X1 [Pistacia vera] | 0 |
| Q9LJR3 | Protein SPA1-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=SPA3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7ICS4 | Protein kinase domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_008229 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology