Basic Information
Locus ID:
pistato.v30160120
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 12088031 | 12096605 | - | pistato.v30160120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 50,291.03 Da | 47.49 | 89.91 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 265 | 337 | 1.56281E-14 | - |
| CDD | cd00028 | B_lectin | 39 | 147 | 1.21212E-26 | IPR001480 |
| Pfam | PF11883 | Domain of unknown function (DUF3403) | 405 | 450 | 6.8E-10 | IPR021820 |
| Pfam | PF01453 | D-mannose binding lectin | 75 | 173 | 4.2E-25 | IPR001480 |
| Pfam | PF08276 | PAN-like domain | 263 | 314 | 6.6E-9 | IPR003609 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 61 | 203 | 8.97E-21 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 233 | 410 | 1.5E-6 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 21 | 144 | 6.4E-19 | IPR036426 |
| SMART | SM00473 | ntp_6 | 262 | 336 | 0.0049 | IPR003609 |
| SMART | SM00108 | blect_4 | 32 | 147 | 1.7E-29 | IPR001480 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 26 | 145 | 14.230923 | IPR001480 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19130.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_031280048.1 | LOW QUALITY PROTEIN: G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 [Pistacia vera] | 0 |
| O64477 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana OX=3702 GN=At2g19130 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6A4LDN0 | Receptor-like serine/threonine-protein kinase (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_11642 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 2 | pistato.v30129710, pistato.v30160120 |
| Casuarinaceae | Casuarina equisetifolia | 14 | Ceq01G1391, Ceq01G1393, Ceq01G1394, Ceq01G1396, Ceq01G1397 ... |
| Casuarinaceae | Casuarina glauca | 25 | Cgl01G1556, Cgl01G1558, Cgl01G1559, Cgl01G1561, Cgl01G1566 ... |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-1050 |
| Poaceae | Triticum aestivum | 1 | TraesCS2A02G535100.1 |