Basic Information
Locus ID:
pistato.v30159560
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one- codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 11277883 | 11278770 | + | pistato.v30159560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.81 | 12,905.75 Da | 36.28 | 87.89 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.30.70.240 | - | 55 | 114 | 1.5E-8 | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G39900.1 | Small GTP-binding protein. | 0 |
| RefSeq | XP_031287337.1 | translation factor GUF1 homolog, mitochondrial [Pistacia vera] | 0 |
| B9RUN8 | Translation factor GUF1 homolog, mitochondrial OS=Ricinus communis OX=3988 GN=RCOM_0855130 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5C7HQV1 | Translation factor GUF1 homolog, mitochondrial OS=Acer yangbiense OX=1000413 GN=EZV62_016984 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 4 | Sgl43929, Sgl43938, Sgl48695, Sgl48702 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30047220, pistato.v30159560 |
| Arecaceae | Cocos nucifera | 1 | COCNU_16G004000 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp4g00570.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB02g017100.2N |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g36000 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc10g10250 |