halophFGD

Basic Information

Locus ID: pistato.v30157550

Species & Taxonomic ID: Pistacia vera & 55513

Genome Assembly: GWHBKLD00000000

Description: LRR-repeat protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr3	8322725	8323640	+	pistato.v30157550

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.32	19,584.80 Da	35.46	114.88	0.06

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00646	F-box domain	12	45	3.0E-7	IPR001810
SUPERFAMILY	SSF81383	F-box domain	10	53	7.59E-13	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	2	48	9.9E-9	-
ProSiteProfiles	PS50181	F-box domain profile.	10	46	9.470975	IPR001810

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT2G26030.1	F-box/RNI-like/FBD-like domains-containing protein.	0
RefSeq	XP_028806313.1	F-box/LRR-repeat protein 13-like [Prosopis alba]	0
Swiss-Prot	Q8H1M0	F-box/FBD/LRR-repeat protein At2g26030 OS=Arabidopsis thaliana OX=3702 GN=At2g26030 PE=2 SV=2	0
TrEMBL	A0A2P6QA15	Putative F-box domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0030621 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Anacardiaceae	Pistacia vera	2	pistato.v30157550, pistato.v30157580