Basic Information
Locus ID:
pistato.v30143380
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
May be involved in both secretory and endocytic intracellular trafficking in the endosomal prevacuolar compartments
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 15176687 | 15180033 | + | pistato.v30143380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.95 | 28,741.34 Da | 43.97 | 96.75 | 0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 141 | 235 | 1.6E-16 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 132 | 236 | 7.15E-22 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 120 | 243 | 3.8E-20 | - |
| SMART | SM00220 | serkin_6 | 119 | 251 | 0.0016 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 255 | 12.131932 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 184 | 196 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78290.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_031266986.1 | CBL-interacting protein kinase 18-like isoform X1 [Pistacia vera] | 0 |
| A2ZAB5 | Serine/threonine-protein kinase SAPK3 OS=Oryza sativa subsp. indica OX=39946 GN=SAPK3 PE=1 SV=2 | 0 | |
| TrEMBL | A0A068VHM3 | DH200=94 genomic scaffold, scaffold_362 OS=Coffea canephora OX=49390 GN=GSCOC_T00009022001 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 2 | pistato.v30034630, pistato.v30143380 |