Basic Information
Locus ID:
pistato.v30143270
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Blue copper
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 14692258 | 14692874 | - | pistato.v30143270 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.71 | 17,813.28 Da | 31.41 | 91.78 | 0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 23 | 122 | 3.99063E-40 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 33 | 114 | 3.8E-23 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 22 | 123 | 1.85E-28 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 21 | 127 | 6.0E-32 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 23 | 124 | 34.681652 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17675.1 | Cupredoxin superfamily protein. Encodes a Plantacyanin/Basic blue family protein | 0 |
| RefSeq | XP_031258841.1 | mavicyanin-like [Pistacia vera] | 0 |
| A0A072U307 | Blue copper protein 1b OS=Medicago truncatula OX=3880 GN=BCP1B PE=2 SV=1 | 0 | |
| TrEMBL | A0A2H5NTE3 | Phytocyanin domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_074210 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology