Basic Information
Locus ID:
pistato.v30135820
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 2836225 | 2839388 | + | pistato.v30135820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.38 | 17,938.91 Da | 57.51 | 60.00 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 75 | 115 | 2.5E-5 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 5 | 121 | 7.42E-12 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 63 | 135 | 2.5E-12 | IPR016135 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 119 | 133 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 119 | 156 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41340.1 | ubiquitin conjugating enzyme 4. Belongs to Ubiquitin conjugating enzyme family. Gene expression is developmentally regulated. | 0 |
| RefSeq | XP_044487131.1 | ubiquitin-conjugating enzyme E2 4 isoform X1 [Mangifera indica] | 0 |
| P42748 | Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana OX=3702 GN=UBC4 PE=2 SV=2 | 0 | |
| TrEMBL | A0A067GCA0 | UBC core domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g029962mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology