Basic Information
Locus ID:
pistato.v30135500
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 2580984 | 2583896 | - | pistato.v30135500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.62 | 38,168.75 Da | 34.45 | 86.95 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 19 | 207 | 5.41213E-114 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 32 | 186 | 1.0E-15 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 206 | 336 | 1.4E-45 | IPR001404 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 10 | 215 | 7.86E-72 | IPR036890 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 200 | 306 | 5.36E-30 | IPR037196 |
| Gene3D | G3DSA:3.30.565.10 | - | 2 | 220 | 7.1E-91 | IPR036890 |
| SMART | SM00387 | HKATPase_4 | 32 | 187 | 3.3E-10 | IPR003594 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 30 | 39 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 123 | 145 | 3.4E-82 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 31 | 53 | 3.4E-82 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 98 | 115 | 3.4E-82 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 175 | 192 | 3.4E-82 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 80 | 97 | 3.4E-82 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 193 | 211 | 3.4E-82 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 10 | 30 | 3.4E-82 | IPR020575 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 313 | 341 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 315 | 341 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52640.1 | heat shock protein 90.1. Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. | 0 |
| RefSeq | XP_031249613.1 | heat shock protein 83 isoform X1 [Pistacia vera] | 0 |
| P51819 | Heat shock protein 83 OS=Ipomoea nil OX=35883 GN=HSP83A PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6RIY5 | HATPase_c domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_016291 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology