Basic Information
Locus ID:
pistato.v30133200
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 589782 | 597616 | - | pistato.v30133200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.59 | 105,228.03 Da | 45.73 | 79.85 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 757 | 909 | 4.53834E-58 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 322 | 908 | 1.0E-87 | IPR001394 |
| Pfam | PF06337 | DUSP domain | 44 | 145 | 9.6E-24 | IPR006615 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 319 | 911 | 6.48E-113 | IPR038765 |
| SUPERFAMILY | SSF143791 | DUSP-like | 17 | 145 | 7.19E-30 | IPR035927 |
| Gene3D | G3DSA:3.10.20.90 | - | 157 | 246 | 2.9E-11 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 675 | 918 | 7.8E-60 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 305 | 534 | 1.3E-67 | - |
| Gene3D | G3DSA:3.30.2230.10 | - | 9 | 156 | 1.2E-35 | - |
| SMART | SM00695 | dusp | 39 | 147 | 1.8E-25 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 321 | 911 | 59.515697 | IPR028889 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 20 | 144 | 20.115797 | IPR006615 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 322 | 337 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 853 | 870 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 662 | 695 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10590.1 | ubiquitin-specific protease 10. encodes a member of the ubiquitin-specific protease family, UBP10 | 0 |
| RefSeq | XP_031259077.1 | ubiquitin carboxyl-terminal hydrolase 9-like [Pistacia vera] | 0 |
| Q93Y01 | Ubiquitin carboxyl-terminal hydrolase 9 OS=Arabidopsis thaliana OX=3702 GN=UBP9 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2H5PXT7 | Ubiquitin carboxyl-terminal hydrolase OS=Citrus unshiu OX=55188 GN=CUMW_177300 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology