Basic Information
Locus ID:
pistato.v30132210
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 33691012 | 33695597 | + | pistato.v30132210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.34 | 84,829.96 Da | 51.08 | 77.72 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 18 | 166 | 6.57566E-58 | - |
| Pfam | PF00582 | Universal stress protein family | 19 | 146 | 4.1E-6 | IPR006016 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 451 | 694 | 5.2E-37 | IPR001245 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 19 | 163 | 8.37E-10 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 430 | 695 | 2.16E-62 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 420 | 518 | 2.5E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 519 | 719 | 4.8E-39 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 18 | 163 | 8.4E-9 | IPR014729 |
| SMART | SM00220 | serkin_6 | 446 | 699 | 3.6E-15 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 446 | 699 | 31.806459 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 564 | 576 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 724 | 757 | - | - |
| Coils | Coil | Coil | 338 | 358 | - | - |
| Coils | Coil | Coil | 372 | 399 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78940.3 | - | 0 |
| RefSeq | XP_031264281.1 | U-box domain-containing protein 35-like [Pistacia vera] | 0 |
| Q8S8S7 | U-box domain-containing protein 34 OS=Arabidopsis thaliana OX=3702 GN=PUB34 PE=3 SV=1 | 0 | |
| TrEMBL | A0A2H5QNP5 | Protein kinase domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_247200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology