Basic Information
Locus ID:
pistato.v30129990
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Sister chromatid cohesion protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 24155366 | 24164660 | - | pistato.v30129990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.29 | 96,441.50 Da | 39.75 | 74.13 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48371 | ARM repeat | 55 | 226 | 3.23E-6 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 652 | 691 | 4.81E-5 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 651 | 702 | 7.4E-10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 385 | 403 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 384 | 403 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 417 | 639 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 372 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 433 | 453 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 470 | 496 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 580 | 594 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 595 | 639 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 780 | 802 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 454 | 469 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 821 | 844 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 516 | 531 | - | - |
| Coils | Coil | Coil | 28 | 48 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80810.5 | - | 0 |
| RefSeq | XP_031274073.1 | uncharacterized protein LOC116132549 isoform X1 [Pistacia vera] | 0 |
| A8MRD9 | Sister chromatid cohesion protein PDS5 homolog D OS=Arabidopsis thaliana OX=3702 GN=PDS5D PE=2 SV=3 | 0 | |
| TrEMBL | V4SJP0 | Tudor domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10024823mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology