Basic Information
Locus ID:
pistato.v30128520
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
transposition, RNA-mediated
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 19967922 | 19977364 | + | pistato.v30128520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.84 | 32,098.56 Da | 43.31 | 72.04 | -0.88 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 151 | 199 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 172 | 199 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 151 | 171 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_031280836.1 | uncharacterized protein LOC116139300 [Pistacia vera] | 0 |
| TrEMBL | A0A5C7GUX9 | CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_027551 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg36236 |
| Anacardiaceae | Pistacia vera | 11 | pistato.v30071390, pistato.v30079570, pistato.v30079870 ... |