Basic Information
Locus ID:
pistato.v30127760
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Protein kinase PVPK-1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 19002278 | 19003776 | + | pistato.v30127760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.29 | 48,209.52 Da | 42.51 | 83.95 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 266 | 379 | 7.7E-21 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 44 | 212 | 5.0E-34 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 19 | 396 | 4.94E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 265 | 397 | 5.7E-36 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 41 | 130 | 9.9E-47 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 131 | 200 | 9.9E-47 | - |
| SMART | SM00220 | serkin_6 | 43 | 379 | 2.3E-83 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 43 | 379 | 43.212597 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 172 | 184 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G26700.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. Encodes PID2, a homolog of PID. Simultaneous disruption of PID(AT2G34650) and its 3 closest homologs (PID2/AT2G26700, WAG1/AT1G53700, and WAG2/AT3G14370) abolishes the formation of cotyledons. | 0 |
| RefSeq | XP_031263504.1 | protein kinase PINOID 2-like [Pistacia vera] | 0 |
| Q64FQ2 | Protein kinase PINOID 2 OS=Arabidopsis thaliana OX=3702 GN=PID2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U7ZQX3 | protein kinase PINOID 2-like OS=Nelumbo nucifera OX=4432 GN=LOC104595341 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_9016 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah014420 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_8g195020 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg40751, Sbi_jg50749 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg2304 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00007916 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl42086, Sgl46859 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000012193, gene:ENSEOMG00000033445 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.8AG0021220, CQ.Regalona.r1.8BG0021150 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30127760, pistato.v30255310 |
| Apiaceae | Apium graveolens | 1 | Ag4G01486 |
| Arecaceae | Cocos nucifera | 2 | COCNU_02G000710, scaffold007047G000020 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103703840, gene-LOC103708779 |
| Asteraceae | Flaveria trinervia | 1 | Ftri4G24698 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT2G26700.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10028571m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp4g08880.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB01g016930.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq06G0664 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl06G0688 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate04g02370, gene.Thate09g13070 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-725 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG07.971 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb6G32658 |
| Poaceae | Echinochloa crus-galli | 3 | AH02.468, BH02.493, CH02.535 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_1AG0011590, gene-QOZ80_1BG0060230 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0241270.1 |
| Poaceae | Oryza coarctata | 2 | Oco01G003060, Oco02G003090 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g07940.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_03G045500 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr02G019850, Chr03G005300, Chr05G010840, Chr08G005810 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G217300 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC3AG015990, gene_TRIDC3BG020820 |
| Poaceae | Triticum aestivum | 3 | TraesCS3A02G128200.1, TraesCS3B02G147300.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb122700_P001 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g10046, Zma_g7702 |
| Portulacaceae | Portulaca oleracea | 3 | evm.TU.LG16.1479, evm.TU.LG23.1163, evm.TU.LG26.186 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc03g12140, gene.Posoc09g12400 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_10_RagTag.353 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-13216 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-8541 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-16756 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000033l.235 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-16535 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-14728 |
| Salicaceae | Populus euphratica | 1 | populus_peu28827 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132636748 |
| Solanaceae | Solanum chilense | 1 | SOLCI005760400 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107005649 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.4518_chr03_+ |
| Tamaricaceae | Tamarix chinensis | 1 | TC10G1677 |
| Zosteraceae | Zostera marina | 1 | Zosma05g07730.v3.1 |