Basic Information
Locus ID:
pistato.v30126560
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 16917572 | 16919478 | + | pistato.v30126560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.01 | 43,117.10 Da | 28.57 | 89.55 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 76 | 351 | 1.49684E-99 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 73 | 348 | 5.4E-53 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 48 | 348 | 1.89E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 41 | 155 | 8.8E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 156 | 364 | 5.7E-62 | - |
| SMART | SM00220 | serkin_6 | 70 | 351 | 1.0E-42 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 11 | 366 | 4.4E-43 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 70 | 362 | 42.336288 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 76 | 109 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 200 | 212 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28930.2 | protein kinase 1B. | 0 |
| RefSeq | XP_031270988.1 | probable serine/threonine-protein kinase PBL11 [Pistacia vera] | 0 |
| Q65XV8 | Receptor-like cytoplasmic kinase 176 OS=Oryza sativa subsp. japonica OX=39947 GN=RLCK176 PE=1 SV=1 | 0 | |
| TrEMBL | V4TEY4 | Protein kinase domain-containing protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10033827mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30126560 |
| Asteraceae | Flaveria trinervia | 1 | Ftri9G04708 |