Basic Information
Locus ID:
pistato.v30126130
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 15127677 | 15131215 | - | pistato.v30126130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.33 | 80,384.14 Da | 53.41 | 78.42 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00028 | B_lectin | 38 | 172 | 4.56492E-23 | IPR001480 |
| Pfam | PF00069 | Protein kinase domain | 465 | 569 | 8.3E-19 | IPR000719 |
| Pfam | PF11883 | Domain of unknown function (DUF3403) | 665 | 704 | 1.1E-11 | IPR021820 |
| Pfam | PF08276 | PAN-like domain | 337 | 373 | 9.1E-8 | IPR003609 |
| Pfam | PF01453 | D-mannose binding lectin | 93 | 197 | 2.6E-28 | IPR001480 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 477 | 686 | 1.48E-32 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 93 | 199 | 3.01E-18 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 468 | 663 | 1.6E-37 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 25 | 169 | 3.9E-16 | IPR036426 |
| SMART | SM00220 | serkin_6 | 408 | 661 | 2.8E-5 | IPR000719 |
| SMART | SM00108 | blect_4 | 35 | 172 | 3.1E-19 | IPR001480 |
| PIRSF | PIRSF000641 | SRK | 294 | 449 | 5.4E-9 | IPR024171 |
| PIRSF | PIRSF000641 | SRK | 467 | 704 | 3.8E-72 | IPR024171 |
| PIRSF | PIRSF000641 | SRK | 2 | 289 | 5.9E-51 | IPR024171 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 324 | 665 | 15.736102 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 29 | 165 | 12.236073 | IPR001480 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 509 | 521 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G16030.6 | - | 0 |
| RefSeq | XP_031252753.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 isoform X1 [Pistacia vera] | 0 |
| Q9LW83 | G-type lectin S-receptor-like serine/threonine-protein kinase CES101 OS=Arabidopsis thaliana OX=3702 GN=CES101 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2H5PFR4 | Receptor-like serine/threonine-protein kinase OS=Citrus unshiu OX=55188 GN=CUMW_132330 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah018508 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000044267 |
| Anacardiaceae | Pistacia vera | 6 | pistato.v30036830, pistato.v30036880, pistato.v30036890 ... |
| Brassicaceae | Arabidopsis thaliana | 2 | AT1G67520.1, AT3G16030.1 |
| Brassicaceae | Brassica nigra | 3 | BniB01g048880.2N, BniB03g025090.2N, BniB07g053710.2N |
| Plantaginaceae | Plantago ovata | 1 | Pov_00005846 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_18_RagTag.496 |
| Rhizophoraceae | Carallia pectinifolia | 8 | nbisL1-mrna-27876, nbisL1-mrna-27877, nbisL1-mrna-27878 ... |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-10731, nbisL1-mrna-10732 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-7927 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-19668 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-21281 |