Basic Information
Locus ID:
pistato.v30126000
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
leucine-rich repeat protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 14966737 | 14968368 | + | pistato.v30126000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 29,428.98 Da | 37.04 | 105.53 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 11 | 100 | 1.2E-16 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 113 | 261 | 5.77E-12 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 9 | 103 | 4.72E-28 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 115 | 265 | 1.3E-13 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 114 | 2.3E-29 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 210 | 20.485125 | IPR000719 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 12 | 24 | - | IPR008266 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16150.1 | wall associated kinase-like 4. Encodes a cell-wall associated kinase like protein of the receptor-like kinase (RLK) superfamily. Likely involved in Arabidopsis root mineral responses to Zn2+, Cu2+, K+, Na+ and Ni+. | 0 |
| RefSeq | XP_031270041.1 | proline-rich receptor-like protein kinase PERK3 [Pistacia vera] | 0 |
| Q9S9M2 | Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana OX=3702 GN=WAKL4 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5N5NBS4 | Protein kinase domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_003975 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 8 | pistato.v30037060, pistato.v30037080, pistato.v30063680 ... |