Basic Information
Locus ID:
pistato.v30125450
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 13978942 | 13983686 | - | pistato.v30125450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 86,053.31 Da | 41.37 | 85.45 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00028 | B_lectin | 38 | 153 | 4.68279E-20 | IPR001480 |
| Pfam | PF11883 | Domain of unknown function (DUF3403) | 660 | 700 | 6.6E-8 | IPR021820 |
| Pfam | PF01453 | D-mannose binding lectin | 75 | 178 | 2.3E-28 | IPR001480 |
| Pfam | PF08276 | PAN-like domain | 307 | 340 | 8.0E-6 | IPR003609 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 485 | 556 | 3.7E-9 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 559 | 656 | 2.2E-5 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 468 | 685 | 3.65E-32 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 67 | 181 | 1.44E-20 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 558 | 663 | 2.6E-11 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 28 | 150 | 1.1E-12 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 457 | 557 | 3.5E-34 | - |
| SMART | SM00108 | blect_4 | 35 | 153 | 1.1E-18 | IPR001480 |
| PIRSF | PIRSF000641 | SRK | 558 | 704 | 3.6E-41 | IPR024171 |
| PIRSF | PIRSF000641 | SRK | 270 | 557 | 4.8E-50 | IPR024171 |
| PIRSF | PIRSF000641 | SRK | 703 | 763 | 4.7E-6 | IPR024171 |
| PIRSF | PIRSF000641 | SRK | 4 | 270 | 1.8E-48 | IPR024171 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 690 | 763 | 8.028986 | IPR001480 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 29 | 146 | 11.929173 | IPR001480 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 483 | 763 | 11.340428 | IPR000719 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G16030.1 | lectin protein kinase family protein. | 0 |
| RefSeq | XP_031250259.1 | LOW QUALITY PROTEIN: G-type lectin S-receptor-like serine/threonine-protein kinase CES101 [Pistacia vera] | 0 |
| Q9LW83 | G-type lectin S-receptor-like serine/threonine-protein kinase CES101 OS=Arabidopsis thaliana OX=3702 GN=CES101 PE=2 SV=2 | 0 | |
| TrEMBL | V4ULH4 | Receptor-like serine/threonine-protein kinase OS=Citrus clementina OX=85681 GN=CICLE_v10024887mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 6 | pistato.v30036730, pistato.v30036740, pistato.v30036770 ... |