Basic Information
Locus ID:
pistato.v30125440
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 13972594 | 13978752 | - | pistato.v30125440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.45 | 110,330.98 Da | 44.38 | 85.83 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 702 | 854 | 5.5E-35 | IPR001245 |
| Pfam | PF08276 | PAN-like domain | 547 | 582 | 4.1E-5 | IPR003609 |
| Pfam | PF11883 | Domain of unknown function (DUF3403) | 918 | 963 | 5.0E-10 | IPR021820 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 683 | 941 | 5.66E-58 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 209 | 284 | 4.43E-15 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 776 | 862 | 5.7E-23 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 365 | 479 | 9.5E-7 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 196 | 287 | 5.9E-23 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 665 | 775 | 1.0E-38 | - |
| SMART | SM00220 | serkin_6 | 700 | 932 | 2.0E-12 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 366 | 494 | 9.256586 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 88 | 168 | 7.327139 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 700 | 963 | 28.923124 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 821 | 833 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67520.4 | - | 0 |
| RefSeq | XP_044497369.1 | G-type lectin S-receptor-like serine/threonine-protein kinase CES101 isoform X1 [Mangifera indica] | 0 |
| O64793 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 OS=Arabidopsis thaliana OX=3702 GN=At1g67520 PE=2 SV=3 | 0 | |
| TrEMBL | A0A2H5PFQ1 | Non-specific serine/threonine protein kinase OS=Citrus unshiu OX=55188 GN=CUMW_132360 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 6 | pistato.v30036730, pistato.v30036740, pistato.v30036770 ... |