Basic Information
Locus ID:
pistato.v30125320
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 13387777 | 13397726 | - | pistato.v30125320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 206,067.06 Da | 46.59 | 77.78 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 389 | 672 | 2.22087E-133 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1558 | 1821 | 1.93158E-150 | IPR044769 |
| CDD | cd15725 | FYVE_PIKfyve_Fab1 | 32 | 98 | 2.57172E-30 | - |
| Pfam | PF01363 | FYVE zinc finger | 33 | 101 | 4.1E-18 | IPR000306 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1597 | 1763 | 9.9E-34 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 409 | 665 | 3.2E-29 | IPR002423 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 31 | 106 | 8.15E-20 | IPR011011 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1553 | 1821 | 2.42E-80 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 455 | 638 | 2.56E-37 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1534 | 1678 | 1.1E-36 | IPR027484 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 24 | 111 | 1.3E-21 | IPR013083 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 454 | 638 | 1.2E-48 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1681 | 1822 | 3.0E-42 | - |
| SMART | SM00330 | PIPK_2 | 1531 | 1822 | 2.1E-130 | IPR002498 |
| SMART | SM00064 | fyve_4 | 28 | 102 | 2.2E-21 | IPR000306 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1499 | 1821 | 58.119869 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 36 | 101 | 12.959176 | IPR017455 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 192 | 212 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_031274181.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B [Pistacia vera] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7II67 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Acer yangbiense OX=1000413 GN=EZV62_003121 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology