Basic Information
Locus ID:
pistato.v30122340
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the disease resistance NB-LRR family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 9035926 | 9045492 | - | pistato.v30122340 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 148,974.27 Da | 46.13 | 94.42 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 380 | 590 | 2.2E-42 | IPR002182 |
| Pfam | PF13855 | Leucine rich repeat | 818 | 875 | 5.4E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 717 | 1232 | 6.29E-35 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 375 | 624 | 5.99E-44 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1128 | 1213 | 1.7E-5 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 696 | 925 | 3.7E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 955 | 1124 | 5.2E-12 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 356 | 521 | 9.3E-29 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 525 | 609 | 3.6E-17 | IPR042197 |
| PRINTS | PR00364 | Disease resistance protein signature | 837 | 853 | 1.9E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 397 | 412 | 1.9E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 559 | 573 | 1.9E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 467 | 481 | 1.9E-20 | - |
| Coils | Coil | Coil | 175 | 209 | - | - |
| Coils | Coil | Coil | 255 | 303 | - | - |
| Coils | Coil | Coil | 649 | 669 | - | - |
| Coils | Coil | Coil | 74 | 105 | - | - |
| Coils | Coil | Coil | 32 | 66 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_031280989.1 | probable disease resistance protein At4g27220 [Pistacia vera] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2H5QRW5 | AAA domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_255870 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 40 | pistato.v30030420, pistato.v30098710, pistato.v30098730 ... |